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Galaxy
SynBioCAD

Galaxy synthetic biology design and engineering

Galaxy SynBioCAD is an open access Galaxy workflow environment to design and build different metabolic routes for the production of a compound of interest. Galaxy-SynBioCAD combines the proven efficiency of RetroPath2.0 and automated script generator to drive robotized workstations for vector assembly and strain transformation.

Joan Hérisson

Operational manager

Jean-Loup Faulon

Scientific manager

Galaxy SynBioCAD is an open access Galaxy workflow environment to design and build different metabolic routes for the production of a compound of interest. Galaxy-SynBioCAD comprises :

  1. open-source retrosynthesis software based on generalized reaction rules that generates networks linking the target compound(s)  to the metabolites of the chassis strain,
  2. downstream analysis method with flux analysis,
  3. the design of experiments to determine the DNA parts to be assemble to build pathway libraries,
  4. automated script generator to drive robotized workstations for vector assembly and strain transformation.

The intuitive, user-friendly platform of the Galaxy SynBioCAD portal

Team members

Jean-Loup FAULON

Joan HERISSON

Thomas DUIGOU